PPDB

 The Plant Proteome Database

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AT5G17430.1   Integrase-type DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17430.2 11Arabidopsis thaliana050999990 (0)_
AT1G51190.1 11Arabidopsis thaliana5E-12720785960 (0)C
AT3G20840.1 11Arabidopsis thaliana1E-12425472850 (0)_
Os04g42570.1 7Oryza sativa2E-12947549610 (0)_
Os01g67410.1 7Oryza sativa3E-12420087970 (0)C
Os11g19060.1 7Oryza sativa6E-12233261700 (0)_
Zm00001eb247080_P001 agpv5Zea mays5E-13347849600 (0)_
GRMZM2G366434_P01 3.21Zea mays4E-13247849600 (0)_
v1_GRMZM2G141638_P01 4a53Zea mays4E-12746350600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(2)
TargetP: Cytoplasm (Class 3 C0.163; M0.163; S0.042; _0.705)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 584 aa (-cTP 554)
Molecular Weight 64.55 kDA(-cTP )
PI 5.99(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help