PPDB

The Plant Proteome Database

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AT5G17410.1   Spc97 / Spc98 family of spindle pole body (SBP) component

Lab Annot. tubulin protein
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17410.2 11Arabidopsis thaliana067999991 (1)C
AT5G06680.1 11Arabidopsis thaliana2E-4157225441 (1)_
AT3G53760.1 11Arabidopsis thaliana8E-2369621372 (2)_
Os04g42330.1 7Oryza sativa0704687811 (11)_
Os04g42330.2 7Oryza sativa0699677811 (11)_
Os09g27370.1 7Oryza sativa2E-3759724452 (2)_
GRMZM2G071518_P01 3.21Zea mays070367782 (2)M
Zm00001eb425980_P001 agpv5Zea mays070367780 (0)M
v1_GRMZM2G071518_P01 4a53Zea mays070367783 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GCP_C_terminal(2) GCP_N_terminal(3)
TargetP: Cytoplasm (Class 5 C0.394; M0.121; S0.051; _0.405)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 678 aa (-cTP 647)
Molecular Weight 76.94 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


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