PPDB

The Plant Proteome Database

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AT5G17330.1   glutamate decarboxylase

Lab Annot. glutamate decarboxylase 1 (GAD 1), sp:Q42521
Mapman: 13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G02010.2 11Arabidopsis thaliana050381880 (0)C
AT2G02010.1 11Arabidopsis thaliana050381885 (3)_
AT1G65960.2 11Arabidopsis thaliana05028189608 (435)_
Os03g51080.1 7Oryza sativa050283900 (0)C
Os03g13300.1 7Oryza sativa050283900 (0)C
Os08g36320.3 7Oryza sativa050278870 (0)_
Zm00001eb055490_P001 agpv5Zea mays050283890 (0)_
GRMZM5G826838_P01 3.21Zea mays0502838927 (26)_
v1_GRMZM2G055452_P01 4a53Zea mays0502838928 (28)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aminotran_5(1) Pyridoxal_deC(1)
TargetP: Chloroplast (Class 5 C0.434; M0.083; S0.161; _0.359)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 502 aa (-cTP 473)
Molecular Weight 57.07 kDA(-cTP 53.86)
PI 5.37(-cTP 5.21)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16502469(cell suspension-Cd-up)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


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