PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17300.1   Homeodomain-like superfamily protein

Lab Annot. Homeodomain-like protein
Mapman: 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17300.2 11Arabidopsis thaliana030899990 (0)_
AT5G37260.1 11Arabidopsis thaliana3E-5534543530 (0)_
AT1G18330.1 11Arabidopsis thaliana1E-4320150650 (0)_
Os02g46030.1 7Oryza sativa6E-4046432460 (0)_
Os06g51260.1 7Oryza sativa5E-3923145590 (0)_
Os04g49450.1 7Oryza sativa1E-3722343600 (0)_
Zm00001eb228670_P002 agpv5Zea mays9E-4122548610 (0)_
v1_GRMZM2G145041_P01 4a53Zea mays9E-4122548610 (0)_
GRMZM2G145041_P01 3.21Zea mays9E-4122548610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Myb_DNA-bind_6(1) Myb_DNA-bind_7(1) Myb_DNA-binding(1) TonB_N(1) UPF0565(1)
TargetP: Cytoplasm (Class 3 C0.082; M0.305; S0.078; _0.778)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 387 aa (-cTP 381)
Molecular Weight 42.98 kDA(-cTP )
PI 8.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help