PPDB

The Plant Proteome Database

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AT5G17290.1   autophagy protein Apg5 family

Lab Annot. ATG5 - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g02570.1 7Oryza sativa7E-12336551670 (0)_
Zm00001eb230080_P002 agpv5Zea mays7E-12635350670 (0)_
v1_GRMZM2G098420_P02 4a53Zea mays7E-12635350670 (0)_
GRMZM2G098420_P02 3.21Zea mays7E-12635350671 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG5(2)
TargetP: Cytoplasm (Class 3 C0.108; M0.212; S0.079; _0.710)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 337 aa (-cTP 312)
Molecular Weight 38.48 kDA(-cTP )
PI 4.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help