PPDB

 The Plant Proteome Database

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AT5G17240.1   SET domain group 40
Lab Annot.
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17240.2 11Arabidopsis thaliana04201001000 (0)_
AT3G55080.1 11Arabidopsis thaliana6E-1126822431 (1)M
AT3G07670.1 11Arabidopsis thaliana1E-09322274227 (13)M
Os07g28840.1 7Oryza sativa3E-14648647660 (0)C
Os09g24530.1 7Oryza sativa3E-14265294312 (12)C
Os01g65730.1 7Oryza sativa1E-1332025400 (0)M
GRMZM2G092131_P01 3.21Zea mays9E-15348549640 (0)C
Zm00001eb320090_P001 agpv5Zea mays9E-15348549640 (0)C
v1_GRMZM2G092131_P01 4a53Zea mays9E-15348549640 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Rubis-subs-bind(1) SET(1)
TargetP: Cytoplasm (Class 2 C0.064; M0.081; S0.107; _0.826)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 491 aa (-cTP 436)
Molecular Weight 55.87 kDA(-cTP )
PI 5.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help