PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17220.1   glutathione S-transferase phi 12
Lab Annot. glutathione S-transferase, putative
Mapman: 26.9 misc.glutathione S transferases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03190.1 11Arabidopsis thaliana6E-11221468830 (0)_
AT2G30860.1 11Arabidopsis thaliana1E-5620742631093 (770)_
AT2G30870.1 11Arabidopsis thaliana4E-562083964581 (344)S
Os03g04260.1 7Oryza sativa3E-49213385629 (29)S
Os01g70770.1 7Oryza sativa3E-49205396031 (31)M
Os01g27360.1 7Oryza sativa6E-4821139562 (2)S
Zm00001eb142220_P001 agpv5Zea mays6E-5120542610 (0)_
v1_GRMZM2G146246_P01 4a53Zea mays6E-512054261112 (112)_
GRMZM2G146246_P02 3.21Zea mays6E-512054261168 (123)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GST_C(1) GST_C_2(1) GST_C_3(1) GST_N(1) GST_N_2(1) GST_N_3(1) HTH_25(1)
TargetP: Secreted (Class 4 C0.005; M0.257; S0.668; _0.343)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 214 aa (-cTP 195)
Molecular Weight 24.58 kDA(-cTP )
PI 5.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1521Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2052Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to siliques)
20118269(developing seeds)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help