PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17190.1   B-cell receptor-associated-like protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03160.1 11Arabidopsis thaliana6E-8913092972 (0)S
AT1G48440.1 11Arabidopsis thaliana2E-2912938620 (0)S
AT3G17780.1 11Arabidopsis thaliana7E-2612938620 (0)S
Os02g50210.1 7Oryza sativa1E-5813174910 (0)S
Os03g13750.1 7Oryza sativa2E-2912942624 (4)S
Os03g13750.2 7Oryza sativa9E-2711746642 (2)S
v1_GRMZM2G385999_P01 4a53Zea mays5E-5913174912 (1)S
Zm00001eb253800_P001 agpv5Zea mays5E-5913174910 (0)S
GRMZM2G385999_P01 3.21Zea mays5E-5913174912 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Bap31(1)
TargetP: Secreted (Class 3 C0.007; M0.029; S0.905; _0.460)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 2 TMs
TAT position:
Length 130 aa (-cTP 99)
Molecular Weight 14.88 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help