PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17140.1   Cysteine proteinases superfamily protein

Lab Annot. Cysteine proteinase
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17080.1 11Arabidopsis thaliana6E-2611242660 (0)_
AT1G03720.2 11Arabidopsis thaliana6E-107536580 (0)_
AT1G03720.1 11Arabidopsis thaliana3E-093855780 (0)_
Os09g39160.1 7Oryza sativa8E-0910431500 (0)_
Os01g42790.1 7Oryza sativa4E-084440650 (0)S
Os09g39110.1 7Oryza sativa9E-087431590 (0)S
Zm00001eb292310_P002 agpv5Zea mays1E-079837550 (0)S
GRMZM2G006377_P01 3.21Zea mays1E-079837551 (0)S
Zm00001eb292310_P004 agpv5Zea mays1E-079837550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C1(1) Peptidase_C1_2(1)
TargetP: Cytoplasm (Class 3 C0.044; M0.181; S0.223; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 112 aa (-cTP 107)
Molecular Weight 12.76 kDA(-cTP )
PI 9.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help