PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17050.1   UDP-glucosyl transferase 78D2

Lab Annot. UDP-glucoronosyl/UDP-glucosyl transferase protein
Mapman: 26.2 misc.UDP glucosyl and glucoronyl transferases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17030.1 11Arabidopsis thaliana046175840 (0)C
AT1G30530.1 11Arabidopsis thaliana0460718159 (19)S
AT5G17040.1 11Arabidopsis thaliana045271820 (0)C
Os06g09240.1 7Oryza sativa1E-10244942602 (2)S
Os07g05420.1 7Oryza sativa1E-8747939550 (0)C
Os02g51910.1 7Oryza sativa6E-5947529480 (0)M
v1_GRMZM2G165390_P01 4a53Zea mays1E-98461405712 (12)C
Zm00001eb374230_P001 agpv5Zea mays1E-9846140570 (0)C
GRMZM2G165390_P01 3.21Zea mays1E-98461405717 (17)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DicB(1) Glyco_tran_28_C(1) uDENN(2) UDPGT(1)
TargetP: Chloroplast (Class 5 C0.420; M0.139; S0.033; _0.262)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 424) (-lTP 351)
Molecular Weight 50.49 kDA(-cTP 46.64)(-lTP 38.70)
PI 5.67(-cTP 5.32)(-lTP 5.719)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2311Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help