PPDB

The Plant Proteome Database

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AT5G16990.1   Zinc-binding dehydrogenase family protein

Lab Annot. NADP-dependent oxidoreductase, putative
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16970.1 11Arabidopsis thaliana03429195167 (93)_
AT5G17000.1 11Arabidopsis thaliana0343909412 (6)_
AT3G03080.1 11Arabidopsis thaliana034379900 (0)_
Os04g41960.1 7Oryza sativa1E-16734565798 (8)_
Os12g12580.1 7Oryza sativa2E-152344627716 (16)_
Os12g12590.1 7Oryza sativa3E-14834460750 (0)_
Zm00001eb333970_P001 agpv5Zea mays1E-15435262760 (0)_
v1_GRMZM2G328094_P01 4a53Zea mays1E-154352627650 (50)_
GRMZM2G328094_P01 3.21Zea mays1E-154352627690 (45)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ADH_N_2(1) ADH_zinc_N(1) ADH_zinc_N_2(1) DUF2855(1)
TargetP: Cytoplasm (Class 2 C0.233; M0.034; S0.077; _0.880)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 343 aa (-cTP 329)
Molecular Weight 37.99 kDA(-cTP )
PI 8.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


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