PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G16930.1 AAA-type ATPase family protein

Lab Annot.

AAA domain protein
Mapman: 26.55* AAA domain

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03060.1 11 Arabidopsis thaliana 0 639 83 89 7 (7) C
AT2G18330.1 11 Arabidopsis thaliana 0 626 62 78 6 (6) C
AT4G36580.1 11 Arabidopsis thaliana 0 555 64 80 0 (0) C
Os02g46990.1 7 Oryza sativa 0 571 72 83 10 (10) S
Os02g47760.1 7 Oryza sativa 0 525 61 77 0 (0) _
Os06g12160.1 7 Oryza sativa 6E-16 225 30 48 5 (5) M
Zm00001eb187980_P001 agpv5 Zea mays 0 622 68 80 0 (0) S
v1_GRMZM2G066615_P01 4a53 Zea mays 0 622 68 80 12 (12) S
GRMZM2G066615_P01 3.21 Zea mays 0 622 68 80 6 (6) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_11(1) AAA_16(2) AAA_17(1) AAA_18(1) AAA_22(2) AAA_24(1) AAA_28(1) AAA
TargetP:	Secreted (Class 5 C0.546; M0.007; S0.582; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	644 aa (-cTP 581)
Molecular Weight	70.99 kDA(-cTP )
PI	9.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2274	Detail								seedlings [A. thaliana]	total tissue	wild-type
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21311031(mitochondria)
21472856(mitochondria-LC-MS/MS-uncurated)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data