PPDB

PPDB	The Plant Proteome Database

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AT5G16910.1 cellulose-synthase like D2

Lab Annot.

cellulose-synthase like D2
Mapman: 10.2.1 cell wall.cellulose synthesis.cellulose synthase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03050.1 11 Arabidopsis thaliana 0 1152 88 93 0 (0) C
AT4G38190.1 11 Arabidopsis thaliana 0 1107 70 83 0 (0) C
AT1G02730.1 11 Arabidopsis thaliana 0 1168 63 76 0 (0) C
Os06g02180.1 7 Oryza sativa 0 1171 79 87 2 (2) M
Os10g42750.1 7 Oryza sativa 0 1158 75 84 0 (0) C
Os08g25710.1 7 Oryza sativa 0 1138 65 77 0 (0) _
Zm00001eb379070_P001 agpv5 Zea mays 0 1140 79 88 0 (0) C
Zm00001eb379070_P002 agpv5 Zea mays 0 1140 79 88 0 (0) C
GRMZM5G870176_P01 3.21 Zea mays 0 1140 79 88 2 (2) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cellulose_synt(1) Glyco_tranf_2_3(2) Glyco_trans_2_3(3) Glycos_transf_2(1) IBR(2
TargetP:	Chloroplast (Class 5 C0.620; M0.092; S0.046; _0.469)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	8 TMs
Aramemnon:	8 TMs
TAT position:
Length	1145 aa (-cTP 1118)
Molecular Weight	128.36 kDA(-cTP 125.35)
PI	7.50(-cTP 7.33)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
21826108(SYP trans-Golgi-filtered)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data