PPDB

PPDB	The Plant Proteome Database

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AT5G16830.1 syntaxin of plants 21

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: trans-Golgi network transport vesicle & late endosome11115874,9144962

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G46860.1 11 Arabidopsis thaliana 3E-109 268 61 78 34 (34) M
AT4G17730.2 11 Arabidopsis thaliana 3E-90 266 58 75 0 (0) M
AT4G17730.1 11 Arabidopsis thaliana 1E-89 247 60 78 0 (0) M
Os01g15110.1 7 Oryza sativa 1E-102 268 58 78 3 (3) _
Os02g47440.1 7 Oryza sativa 7E-72 268 49 67 0 (0) M
Os02g47440.3 7 Oryza sativa 3E-43 159 51 74 0 (0) _
GRMZM2G017329_P01 3.21 Zea mays 4E-103 270 59 77 11 (11) _
Zm00001eb333570_P001 agpv5 Zea mays 4E-103 270 59 77 0 (0) _
v1_GRMZM2G017329_P01 4a53 Zea mays 4E-103 270 59 77 4 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CEP209_CC5(2) COG2(2) MCPsignal(2) Med9(2) Orf78(1) RE_BstXI(1) SNARE(1) SpoIISA
TargetP:	Chloroplast (Class 3 C0.693; M0.202; S0.013; _0.213)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	279 aa (-cTP 246)
Molecular Weight	31.06 kDA(-cTP 27.49)
PI	6.87(-cTP 6.03)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data