PPDB

PPDB	The Plant Proteome Database

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AT5G16820.1 heat shock factor 3

Lab Annot.

Mapman: 20.2.1 stress.abiotic.heat

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16820.2 11 Arabidopsis thaliana 0 481 100 100 0 (0) C
AT3G02990.1 11 Arabidopsis thaliana 0 497 61 72 0 (0) _
AT1G32330.2 11 Arabidopsis thaliana 4E-115 519 44 56 0 (0) _
Os03g63750.1 7 Oryza sativa 3E-138 496 51 64 0 (0) S
Os03g58160.1 7 Oryza sativa 2E-80 233 56 71 0 (0) _
Os07g08140.1 7 Oryza sativa 4E-79 209 59 74 0 (0) _
GRMZM2G115456_P01 3.21 Zea mays 1E-129 477 50 62 0 (0) S
v1_GRMZM2G115456_P01 4a53 Zea mays 1E-129 477 50 62 0 (0) S
Zm00001eb064860_P001 agpv5 Zea mays 1E-129 477 50 62 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG6_N(1) CENP-F_leu_zip(1) dCache_1(1) DUF334(1) HSF_DNA-bind(1) TMF_DNA_bd(1)
TargetP:	Chloroplast (Class 5 C0.709; M0.050; S0.070; _0.518)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	481 aa (-cTP 435)
Molecular Weight	53.58 kDA(-cTP 48.68)
PI	4.80(-cTP 4.97)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data