PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G16740.1   Transmembrane amino acid transporter family protein

Lab Annot.
Mapman: 34.3 transport.amino acids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G02170.1 11Arabidopsis thaliana1E-8640438600 (0)_
AT5G02180.1 11Arabidopsis thaliana1E-8039435590 (0)_
AT5G02180.2 11Arabidopsis thaliana1E-8039435590 (0)_
Os11g19240.1 7Oryza sativa1E-16143658710 (0)M
Os02g01100.3 7Oryza sativa3E-7641233560 (0)_
Os02g01100.2 7Oryza sativa3E-7641233560 (0)_
v1_GRMZM2G108597_P01 4a53Zea mays5E-15943258700 (0)C
Zm00001eb090330_P001 agpv5Zea mays5E-15943258700 (0)C
GRMZM2G108597_P01 3.21Zea mays5E-15943258700 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aa_trans(1) DUF2534(1) Trp_Tyr_perm(1)
TargetP: Cytoplasm (Class 1 C0.065; M0.039; S0.062; _0.953)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 11 TMs
TAT position:
Length 426 aa (-cTP 412)
Molecular Weight 45.81 kDA(-cTP )
PI 9.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help