PPDB

The Plant Proteome Database

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AT5G16730.1   weak chloroplast movement under blue light protein (DUF827)

Lab Annot. unknown function (DUF827)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02930.3 11Arabidopsis thaliana085466770 (0)C
AT3G02930.1 11Arabidopsis thaliana085466770 (0)C
AT3G02930.2 11Arabidopsis thaliana085066780 (0)C
Os05g02820.1 7Oryza sativa3E-105892345420 (20)C
Os04g50204.1 7Oryza sativa1E-82678355627 (27)C
Os02g24270.1 7Oryza sativa2E-6656935550 (0)C
Zm00001eb224910_P003 agpv5Zea mays1E-9784833520 (0)C
Zm00001eb224910_P002 agpv5Zea mays1E-9784833520 (0)C
Zm00001eb024900_P001 agpv5Zea mays2E-9291932520 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GAS(6) WEMBL(1)
TargetP: Chloroplast (Class 2 C0.949; M0.016; S0.002; _0.162)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 853 aa (-cTP 769)
Molecular Weight 96.21 kDA(-cTP 87.23)
PI 4.91(-cTP 4.77)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help