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AT5G16680.1 RING/FYVE/PHD zinc finger superfamily protein

Lab Annot.

PHD finger protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16680.2 11 Arabidopsis thaliana 0 1311 100 100 0 (0) M
AT3G02890.1 11 Arabidopsis thaliana 0 1203 48 59 1 (1) M
AT3G02890.4 11 Arabidopsis thaliana 0 972 52 63 0 (0) M
Os12g24540.1 7 Oryza sativa 8E-52 533 31 48 0 (0) _
Os11g18770.2 7 Oryza sativa 1E-47 157 51 70 0 (0) _
Os11g18770.1 7 Oryza sativa 2E-47 157 51 70 0 (0) S
GRMZM5G862565_P01 3.21 Zea mays 1E-45 188 48 62 0 (0) _
Zm00001eb024600_P002 agpv5 Zea mays 1E-45 188 48 62 0 (0) C
Zm00001eb024600_P001 agpv5 Zea mays 1E-45 188 48 62 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHD(1)
TargetP:	Mitochondria (Class 4 C0.160; M0.645; S0.005; _0.273)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1311 aa (-cTP 1278)
Molecular Weight	142.24 kDA(-cTP )
PI	6.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data