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AT5G16630.1 DNA repair protein Rad4 family

Lab Annot.

DNA repair protein Rad4 family
Mapman: 28.2 DNA.repair

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16630.2 11 Arabidopsis thaliana 0 865 100 100 2 (2) C
AT5G16630.3 11 Arabidopsis thaliana 0 618 99 100 0 (0) C
Os08g33082.1 7 Oryza sativa 0 829 45 62 0 (0) M
Os07g31460.2 7 Oryza sativa 8E-06 72 34 52 0 (0) _
Os07g31460.1 7 Oryza sativa 9E-06 72 34 52 0 (0) _
Zm00001eb041880_P001 agpv5 Zea mays 0 827 45 61 0 (0) C
GRMZM2G095931_P01 3.21 Zea mays 0 530 52 67 0 (0) _
v1_GRMZM2G095931_P01 4a53 Zea mays 0 530 52 67 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BHD_1(2) BHD_2(2) BHD_3(1) Rad4(1) Transglut_core(2)
TargetP:	Chloroplast (Class 5 C0.495; M0.395; S0.034; _0.170)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	865 aa (-cTP 835)
Molecular Weight	96.28 kDA(-cTP 92.98)
PI	8.65(-cTP 8.23)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data