PPDB

The Plant Proteome Database

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AT5G16550.1   voltage-dependent L-type calcium channel subunit

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os08g32980.1 7Oryza sativa5E-5821444600 (0)_
Os08g32980.2 7Oryza sativa9E-4217245610 (0)_
Zm00001eb179280_P001 agpv5Zea mays5E-5521345620 (0)_
v1_GRMZM2G067277_P01 4a53Zea mays5E-5521345621 (0)_
GRMZM2G067277_P01 3.21Zea mays5E-5521345620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2207(1)
TargetP: Cytoplasm (Class 1 C0.062; M0.077; S0.043; _0.948)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 249 aa (-cTP 169)
Molecular Weight 26.62 kDA(-cTP )
PI 5.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1372Detail       Total leaf 5d ML stress [A. thaliana] chloroplast plastoglobulewild-type
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1514Detail       leaf [A. thaliana] wild-type
1515Detail       leaf [A. thaliana] wild-type
1523Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1542Detail       leaf [A. thaliana] wild-type
1723Detail        [A. thaliana]  
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2308Detail       leaf [A. thaliana] PG plastoglobule 
2310Detail       leaf [A. thaliana] PG plastoglobule 
2311Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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