PPDB

PPDB	The Plant Proteome Database

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AT5G16540.1 zinc finger nuclease 3

Lab Annot.

a zinc finger protein.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16540.2 11 Arabidopsis thaliana 0 375 98 98 0 (0) _
AT5G16540.3 11 Arabidopsis thaliana 0 354 100 100 0 (0) _
AT5G16540.4 11 Arabidopsis thaliana 0 269 100 100 0 (0) _
Os11g28270.1 7 Oryza sativa 4E-135 368 55 66 0 (0) S
Os11g28270.2 7 Oryza sativa 8E-134 362 56 66 0 (0) _
Os12g21700.1 7 Oryza sativa 3E-131 374 53 65 0 (0) _
v1_GRMZM2G146514_P02 4a53 Zea mays 1E-133 373 56 67 0 (0) _
Zm00001eb169920_P003 agpv5 Zea mays 1E-133 373 56 67 0 (0) _
GRMZM2G146514_P02 3.21 Zea mays 1E-133 373 56 67 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Torus(5) zf-CCCH(5) zf-CCCH_2(5) zf-CCCH_3(5) zf-CCCH_4(5) zf_CCCH_4(5)
TargetP:	Cytoplasm (Class 3 C0.160; M0.053; S0.260; _0.820)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	375 aa (-cTP 357)
Molecular Weight	41.53 kDA(-cTP )
PI	8.28(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data