PPDB

 The Plant Proteome Database

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AT5G16510.1   Alpha-1%2C4-glucan-protein synthase family protein
Lab Annot. reversibly glycosylated polypeptide, putative
Mapman: 10.5.5 cell wall.cell wall proteins.RGP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16510.2 11Arabidopsis thaliana034810010025 (21)_
AT3G02230.1 11Arabidopsis thaliana3E-1213395069189 (149)_
AT5G15650.1 11Arabidopsis thaliana7E-1213424970311 (213)_
Os04g56520.2 7Oryza sativa5E-158345637726 (26)_
Os04g56520.1 7Oryza sativa5E-158345637726 (26)_
Os07g41360.1 7Oryza sativa8E-122339496924 (24)_
v1_GRMZM2G173341_P01 4a53Zea mays2E-160339637827 (26)_
GRMZM2G173341_P02 3.21Zea mays2E-160339637832 (32)_
GRMZM2G173341_P01 3.21Zea mays2E-160339637832 (32)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: RGP(1)
TargetP: Cytoplasm (Class 4 C0.046; M0.071; S0.497; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 287)
Molecular Weight 38.59 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
102Detail       petal [B. oleracea] plastid stromaAlboglabra
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 16242667(mature Pollen)
16055689(Glutathionylated suspension cell)
17916636(root (NaCl stress))
18998720(SA-induced secreted proteome (cell culture))
19200160(flower-stage 12)
19546170(mature pollen grains)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19508356(mature pollen grains and pollen tubes)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help