PPDB

The Plant Proteome Database

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AT5G16450.1   Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase

Lab Annot. class II aldolase/RraA-like family.
Mapman: 35 not assigned
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16450.2 11Arabidopsis thaliana3E-11816610010024 (22)_
AT3G02770.1 11Arabidopsis thaliana2E-114166959861 (34)_
AT5G56260.1 11Arabidopsis thaliana7E-81166688364 (48)_
Os01g52460.1 7Oryza sativa9E-9916382931 (1)_
Os01g52460.2 7Oryza sativa9E-9916382931 (1)_
Os02g52430.1 7Oryza sativa3E-97163799217 (17)_
Zm00001eb228860_P002 agpv5Zea mays4E-9916381930 (0)_
Zm00001eb228860_P001 agpv5Zea mays4E-9916381930 (0)_
GRMZM2G005771_P01 3.21Zea mays4E-99163819335 (31)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MOSC_N(1) RraA-like(1)
TargetP: Cytoplasm (Class 4 C0.118; M0.269; S0.127; _0.497)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 166 aa (-cTP 148)
Molecular Weight 17.82 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

16055689(Glutathionylated suspension cell)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20405473(roots - TRX-y interacting proteins)
21173025(root proteome)

Comparative Proteomics Data


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