PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G16380.1   autophagy-like protein%2C putative (Protein of unknown function%2C DUF538)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07470.2 11Arabidopsis thaliana3E-4414948650 (0)S
AT3G07470.3 11Arabidopsis thaliana3E-4413751690 (0)S
AT3G07470.1 11Arabidopsis thaliana6E-44137516984 (67)S
Os01g68500.1 7Oryza sativa7E-3211447673 (3)S
Os07g36410.1 7Oryza sativa4E-26135406016 (16)S
Os03g48710.1 7Oryza sativa2E-1411334500 (0)S
Zm00001eb143640_P001 agpv5Zea mays1E-3011345640 (0)S
v1_GRMZM2G403371_P01 4a53Zea mays1E-3011345644 (4)S
v1_GRMZM2G403371_P02 4a53Zea mays2E-3011345644 (4)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF538(1)
TargetP: Secreted (Class 1 C0.024; M0.011; S0.982; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 195 aa (-cTP 159)
Molecular Weight 21.82 kDA(-cTP )
PI 5.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help