PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G16340.1 AMP-dependent synthetase and ligase family protein

Lab Annot.

AMP-dependent synthetase and ligase protein
Mapman: 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl coa ligase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16370.1 11 Arabidopsis thaliana 0 550 92 95 22 (14) _
AT1G75960.1 11 Arabidopsis thaliana 0 545 79 90 0 (0) _
AT1G21530.2 11 Arabidopsis thaliana 0 552 62 78 0 (0) _
Os04g57850.1 7 Oryza sativa 0 555 64 79 0 (0) _
Os09g38350.1 7 Oryza sativa 0 558 53 70 0 (0) _
Os03g03790.1 7 Oryza sativa 0 554 51 68 0 (0) _
GRMZM2G157113_P02 3.21 Zea mays 0 550 63 78 0 (0) _
v1_GRMZM2G157113_P02 4a53 Zea mays 0 550 63 78 2 (2) _
Zm00001eb280520_P001 agpv5 Zea mays 0 550 63 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AMP-binding(1) AMP-binding_C(1)
TargetP:	Cytoplasm (Class 2 C0.074; M0.103; S0.021; _0.819)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	550 aa (-cTP 474)
Molecular Weight	60.13 kDA(-cTP )
PI	5.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data