PPDB

The Plant Proteome Database

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AT5G16285.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11270.3 11Arabidopsis thaliana5E-177751640 (0)_
AT1G11270.2 11Arabidopsis thaliana2E-167751640 (0)_
AT1G11270.1 11Arabidopsis thaliana2E-167751640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1)
TargetP: Cytoplasm (Class 4 C0.190; M0.180; S0.046; _0.498)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 90 aa (-cTP 31)
Molecular Weight 10.32 kDA(-cTP )
PI 10.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1199Detail       leaf [A. thaliana] co-IP OEC23 stromaclpr2-1
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1468Detail       leaf [A. thaliana] co-IP GST stroma clpc1 x clps (rep. 2)
1515Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type
1539Detail       leaf [A. thaliana] wild-type
1720Detail        [A. thaliana]  
1746Detail       leaf [A. thaliana] Immunoprecipitation Col-0
1909Detail       leaf [A. thaliana] total leaf tissue Col_0

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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