PPDB

The Plant Proteome Database

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AT5G16280.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16280.2 11Arabidopsis thaliana0127299990 (0)S
Os03g57300.1 7Oryza sativa0127248677 (7)_
Os03g57300.2 7Oryza sativa092452704 (4)_
GRMZM2G116126_P01 3.21Zea mays0130149670 (0)_
v1_GRMZM2G116126_P01 4a53Zea mays0130149670 (0)_
Zm00001eb060010_P002 agpv5Zea mays0130149670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SNAP(1) TRAPPC-Trs85(1) TRAPPC9-Trs120(1)
TargetP: Secreted (Class 5 C0.057; M0.035; S0.573; _0.540)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1272 aa (-cTP 1199)
Molecular Weight 143.58 kDA(-cTP )
PI 6.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
21826108(SYP trans-Golgi-filtered)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help