PPDB

The Plant Proteome Database

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AT5G16110.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02555.1 11Arabidopsis thaliana6E-5818460670 (0)_
AT3G02555.2 11Arabidopsis thaliana6E-5818460670 (0)_
AT1G68490.1 11Arabidopsis thaliana8E-3319147590 (0)C
Os12g40840.3 7Oryza sativa1E-0615534410 (0)C
Os12g40840.2 7Oryza sativa1E-0615534410 (0)C
v1_AC207415.3_FGP001 4a53Zea mays2E-1914439510 (0)C
GRMZM2G022629_P01 3.21Zea mays2E-1914439510 (0)S
Zm00001eb135520_P001 agpv5Zea mays2E-1914439510 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 2 C0.886; M0.011; S0.042; _0.117)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 244 aa (-cTP 184)
Molecular Weight 26.52 kDA(-cTP 20.10)
PI 9.15(-cTP 9.46)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
19816138(rosette leaves)

Comparative Proteomics Data

Expr*SourceTech.SpotPepSeqChargeState(z)AreaRatioAmbiguityTissueSample from
195_194ffc1-2 cICAT- exp1 / wt cICAT- exp1cICAT11LHMSQAAADLCDSK + Oxi (M); ICAT_l / LHMSQAAADLCDSK + Oxi (M); ICAT_h31.02 leaf [A. thaliana] chloroplast stroma
249_250ffc1-2 cICAT- exp2 / wt cICAT- exp2cICAT6R.LHMSQAAADLCDSK.A + Ox (M); ICAT_h / R.LHMSQAAADLCDSK.A + Ox (M); ICAT_l20.72 leaf [A. thaliana] chloroplast stroma

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