PPDB

PPDB	The Plant Proteome Database

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AT5G15980.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02490.1 11 Arabidopsis thaliana 0 670 70 82 0 (0) M
AT3G48250.1 11 Arabidopsis thaliana 1E-78 588 28 49 0 (0) C
AT3G06920.3 11 Arabidopsis thaliana 2E-18 408 22 41 0 (0) _
Os01g73950.1 7 Oryza sativa 1E-78 544 31 49 0 (0) C
Os01g73950.2 7 Oryza sativa 1E-78 544 31 49 0 (0) C
Os12g27060.1 7 Oryza sativa 3E-16 404 22 41 0 (0) C
v1_GRMZM2G367678_P01 4a53 Zea mays 5E-62 561 30 48 1 (1) C
v1_GRMZM2G367678_P02 4a53 Zea mays 5E-62 561 30 48 1 (1) C
GRMZM5G838388_P01 3.21 Zea mays 5E-62 561 30 48 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(9) PPR_1(6) PPR_2(10) PPR_long(2) Sec7_N(2) TPR_19(3)
TargetP:	Mitochondria (Class 1 C0.102; M0.904; S0.002; _0.026)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	668 aa (-cTP 589)
Molecular Weight	75.30 kDA(-cTP )
PI	7.09(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20706207(cell cycle interactome (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data