PPDB

PPDB	The Plant Proteome Database

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AT5G15920.1 structural maintenance of chromosomes 5

Lab Annot.

Mapman: 31.2 cell.division

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G61460.1 11 Arabidopsis thaliana 1E-16 639 22 42 1 (0) C
AT5G07660.1 11 Arabidopsis thaliana 2E-13 517 21 42 1 (1) _
AT3G54670.3 10 Arabidopsis thaliana 4E-07 300 27 45 13 (3) _
Os05g51790.1 7 Oryza sativa 0 1057 59 76 0 (0) M
Os05g51790.2 7 Oryza sativa 0 1012 58 75 0 (0) M
Os11g36460.1 7 Oryza sativa 2E-36 89 68 84 0 (0) M
Zm00001eb225540_P003 agpv5 Zea mays 0 670 54 75 0 (0) _
v1_GRMZM2G440916_P02 4a53 Zea mays 0 1047 57 76 0 (0) _
GRMZM2G440916_P02 3.21 Zea mays 0 1047 57 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_15(1) AAA_16(1) AAA_21(3) AAA_23(1) AAA_25(1) AAA_27(3) AAA_29(1) Hyd
TargetP:	Cytoplasm (Class 2 C0.123; M0.141; S0.023; _0.802)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1053 aa (-cTP 977)
Molecular Weight	121.44 kDA(-cTP )
PI	6.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(contaminants cell cycle interactome (cell culture))
21533090(plasmodesmata-crude)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data