PPDB

PPDB	The Plant Proteome Database

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AT5G15820.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02340.1 11 Arabidopsis thaliana 2E-58 323 41 54 0 (0) _
AT3G02340.2 11 Arabidopsis thaliana 2E-58 323 41 54 0 (0) _
AT5G08139.1 11 Arabidopsis thaliana 7E-32 136 45 60 0 (0) _
Os12g02620.1 7 Oryza sativa 2E-28 177 33 52 0 (0) _
Os11g02670.1 7 Oryza sativa 1E-27 103 41 65 0 (0) _
Os10g34590.1 7 Oryza sativa 1E-25 101 44 69 5 (5) M
Zm00001eb206330_P001 agpv5 Zea mays 5E-27 83 61 73 0 (0) _
v1_GRMZM2G336761_P01 4a53 Zea mays 2E-26 83 61 73 0 (0) S
GRMZM2G336761_P01 3.21 Zea mays 2E-26 83 61 73 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) Rad50_zn_hook(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4
TargetP:	Cytoplasm (Class 4 C0.346; M0.042; S0.209; _0.665)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	348 aa (-cTP 332)
Molecular Weight	38.56 kDA(-cTP )
PI	4.08(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data