PPDB

PPDB	The Plant Proteome Database

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AT5G15790.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G15790.5 11 Arabidopsis thaliana 2E-172 232 100 100 0 (0) C
AT5G15790.3 11 Arabidopsis thaliana 2E-172 232 100 100 0 (0) C
AT5G15790.2 11 Arabidopsis thaliana 2E-172 232 100 100 0 (0) C
Os01g70160.1 7 Oryza sativa 2E-58 234 44 59 0 (0) _
Os11g41140.1 7 Oryza sativa 3E-54 236 44 58 0 (0) _
Os03g40170.1 7 Oryza sativa 7E-29 186 38 51 0 (0) _
v1_GRMZM2G468260_P01 4a53 Zea mays 8E-52 232 44 58 0 (0) _
Zm00001eb166460_P001 agpv5 Zea mays 8E-52 232 44 58 0 (0) _
GRMZM2G468260_P01 3.21 Zea mays 8E-52 232 44 58 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4428(2) FANCL_C(1) Rad50_zn_hook(2) TF_Zn_Ribbon(3) zf-ANAPC11(1) zf-C3HC4(2)
TargetP:	Chloroplast (Class 4 C0.856; M0.014; S0.007; _0.554)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	232 aa (-cTP 169) (-lTP 143)
Molecular Weight	26.35 kDA(-cTP 19.42)(-lTP 16.50)
PI	5.20(-cTP 5.15)(-lTP 5.174)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data