PPDB

The Plant Proteome Database

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AT5G15760.1   Ribosomal protein PSRP-3/Ycf65

Lab Annot. PSRP-3B - associates with 30S
Mapman: 29.2.1.1.1.1.83 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3
Curated Location plastid ribosome (Pubmed: 23198870 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68590.1 11Arabidopsis thaliana8E-44897186190 (165)C
AT1G68590.2 11Arabidopsis thaliana2E-43887186178 (153)C
Os04g38750.1 7Oryza sativa3E-4094627934 (34)C
GRMZM2G361569_P01 3.21Zea mays1E-4091648267 (66)C
Zm00001eb424280_P001 agpv5Zea mays1E-409164820 (0)C
Zm00001eb424280_P002 agpv5Zea mays1E-409164820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PSRP-3_Ycf65(1) Spherulin4(2)
TargetP: Chloroplast (Class 1 C0.973; M0.077; S0.003; _0.020)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 183 aa (-cTP 138)
Molecular Weight 20.47 kDA(-cTP 15.76)
PI 9.63(-cTP 8.59)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


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