PPDB

The Plant Proteome Database

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AT5G15580.1   longifolia1

Lab Annot. longifolia1
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02170.1 11Arabidopsis thaliana094161720 (0)_
AT3G02170.2 11Arabidopsis thaliana070262710 (0)_
AT3G02170.3 11Arabidopsis thaliana066760700 (0)_
Os07g01860.1 7Oryza sativa2E-6386529440 (0)M
Os03g30530.2 7Oryza sativa1E-43101926411 (1)_
Os03g30530.1 7Oryza sativa1E-43102026401 (1)_
GRMZM2G061562_P01 3.21Zea mays2E-60111127430 (0)M
Zm00001eb307290_P001 agpv5Zea mays2E-60111127430 (0)M
Zm00001eb307290_P003 agpv5Zea mays2E-60111127430 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BLYB(1) DUF4378(2) VARLMGL(1)
TargetP: Cytoplasm (Class 2 C0.026; M0.184; S0.017; _0.920)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 927 aa (-cTP 886)
Molecular Weight 104.09 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2181Detail       leaf [A. thaliana] stroma Clp ClpF x ClpS1

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


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