PPDB

The Plant Proteome Database

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AT5G15550.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15550.3 11Arabidopsis thaliana04331001000 (0)_
AT5G15550.2 11Arabidopsis thaliana03911001001 (1)_
AT5G52820.1 11Arabidopsis thaliana1E-1249922360 (0)_
Os07g40930.1 7Oryza sativa043762794 (4)M
Os03g23909.1 6Oryza sativa1E-1330824410 (0)_
Os03g23935.1 7Oryza sativa1E-1330824410 (0)_
Zm00001eb326820_P002 agpv5Zea mays043262800 (0)_
GRMZM2G050501_P01 3.21Zea mays043262803 (3)_
GRMZM2G050501_P02 3.21Zea mays043262803 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NLE(1) Nup160(2) WD40(7)
TargetP: Cytoplasm (Class 3 C0.100; M0.226; S0.032; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 433 aa (-cTP 404)
Molecular Weight 47.34 kDA(-cTP )
PI 5.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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