PPDB

PPDB	The Plant Proteome Database

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AT5G15550.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G15550.3 11 Arabidopsis thaliana 0 433 100 100 0 (0) _
AT5G15550.2 11 Arabidopsis thaliana 0 391 100 100 1 (1) _
AT5G52820.1 11 Arabidopsis thaliana 1E-12 499 22 36 0 (0) _
Os07g40930.1 7 Oryza sativa 0 437 62 79 4 (4) M
Os03g23909.1 6 Oryza sativa 1E-13 308 24 41 0 (0) _
Os03g23935.1 7 Oryza sativa 1E-13 308 24 41 0 (0) _
Zm00001eb326820_P002 agpv5 Zea mays 0 432 62 80 0 (0) _
GRMZM2G050501_P01 3.21 Zea mays 0 432 62 80 3 (3) _
GRMZM2G050501_P02 3.21 Zea mays 0 432 62 80 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NLE(1) Nup160(2) WD40(7)
TargetP:	Cytoplasm (Class 3 C0.100; M0.226; S0.032; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	433 aa (-cTP 404)
Molecular Weight	47.34 kDA(-cTP )
PI	5.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data