PPDB

PPDB	The Plant Proteome Database

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AT5G15540.1 PHD finger family protein

Lab Annot.

PHD finger protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G15540.2 11 Arabidopsis thaliana 0 1846 99 99 0 (0) C
Os07g01940.1 7 Oryza sativa 0 1025 56 70 0 (0) _
Zm00001eb298600_P002 agpv5 Zea mays 0 1523 54 71 0 (0) _
GRMZM2G018926_P01 3.21 Zea mays 0 1301 54 70 0 (0) _
v1_GRMZM2G018926_P01 4a53 Zea mays 0 1301 54 70 4 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	API5(3) C1_1(1) Cnd1(4) Cohesin_HEAT(2) HEAT(4) Nipped-B_C(1) PHD(1) PHD_2(1) PH
TargetP:	Chloroplast (Class 5 C0.587; M0.081; S0.112; _0.390)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	1846 aa (-cTP 1820)
Molecular Weight	206.76 kDA(-cTP 204.30)
PI	6.48(-cTP 6.48)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data