PPDB

 The Plant Proteome Database

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AT5G15520.1   Ribosomal protein S19e family protein
Lab Annot. 40S ribosomal protein S19 (RPS19B) (eS19y)
Mapman: 29.2.1.2.1.19 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02080.1 11Arabidopsis thaliana5E-1001429698224 (141)_
AT5G61170.1 11Arabidopsis thaliana5E-9814193100186 (135)_
Os03g31090.1 7Oryza sativa1E-76138738828 (28)_
Os03g31134.1 7Oryza sativa2E-69138738828 (28)_
Zm00001eb393200_P003 agpv5Zea mays2E-8014274890 (0)_
Zm00001eb020200_P001 agpv5Zea mays4E-7914273880 (0)_
Zm00001eb393200_P001 agpv5Zea mays8E-7014269830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_S19e(1)
TargetP: Cytoplasm (Class 2 C0.055; M0.121; S0.128; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 143 aa (-cTP 75)
Molecular Weight 15.82 kDA(-cTP )
PI 10.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
324Detail       leaf [A. thaliana] cell wall enriched wild-type
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type
1596Detail        [A. thaliana]  
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2254Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2286Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

 15496452(nucleolus)
17934214(cytosolic ribosome)
17432890(leaf total membranes)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data

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