PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G15500.1   Ankyrin repeat family protein

Lab Annot.
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15500.2 11Arabidopsis thaliana03511001000 (0)_
AT4G10720.1 11Arabidopsis thaliana3E-8634944610 (0)_
AT4G10720.2 11Arabidopsis thaliana1E-7534940570 (0)_
Os09g16550.1 7Oryza sativa2E-1023627420 (0)_
Os07g09560.1 7Oryza sativa1E-0930924390 (0)_
Os09g15950.1 7Oryza sativa3E-0925925420 (0)_
Zm00001eb318560_P006 agpv5Zea mays6E-0824324400 (0)_
Zm00001eb148670_P001 agpv5Zea mays9E-0825825410 (0)_
v1_GRMZM2G123977_P01 4a53Zea mays9E-0825825410 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ank(3) Ank_2(2) Ank_3(4) Ank_4(3) Ank_5(4) PGG(1) Tmemb_170(1)
TargetP: Secreted (Class 4 C0.012; M0.170; S0.741; _0.376)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 351 aa (-cTP 345)
Molecular Weight 39.69 kDA(-cTP )
PI 9.66(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help