PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G15490.1   UDP-glucose 6-dehydrogenase family protein
Lab Annot. UDP-glucose 6-dehydrogenase, putative
Mapman: 10.1.4 cell wall.precursor synthesis.UGD
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G29360.1 11Arabidopsis thaliana04809296390 (165)S
AT3G29360.2 11Arabidopsis thaliana04809296390 (165)S
AT5G39320.1 11Arabidopsis thaliana04798995102 (53)S
Os12g25690.1 7Oryza sativa0480889585 (85)S
Os12g25700.2 7Oryza sativa0480889565 (65)S
Os12g25700.1 7Oryza sativa0480889565 (65)S
v1_GRMZM2G328500_P02 4a53Zea mays04808995114 (113)S
v1_GRMZM2G328500_P01 4a53Zea mays04808995114 (113)S
GRMZM2G328500_P03 3.21Zea mays04808995193 (119)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NAD_binding_2(1) Shikimate_DH(2) UDPG_MGDP_dh(1) UDPG_MGDP_dh_C(2) UDPG_MGDP_dh_
TargetP: Secreted (Class 4 C0.037; M0.078; S0.705; _0.341)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 480 aa (-cTP 472)
Molecular Weight 53.12 kDA(-cTP )
PI 5.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
102Detail       petal [B. oleracea] plastid stromaAlboglabra
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2193Detail        [A. thaliana] total soluble P3-strepII 26
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2245Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2270Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 16287169(Cell Wall proteome)
16242667(mature Pollen)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
20166762(guard cells (Arabidopsis))
19508356(mature pollen grains and pollen tubes)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help