PPDB

The Plant Proteome Database

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AT5G15400.1   U-box domain-containing protein

Lab Annot. U-box domain-containing protein
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g31400.1 7Oryza sativa01036627713 (13)_
Os12g36710.1 7Oryza sativa1E-0813032420 (0)_
Os05g01460.1 7Oryza sativa2E-067336540 (0)_
Zm00001eb393280_P002 agpv5Zea mays0102563780 (0)_
GRMZM2G075104_P01 3.21Zea mays01025637826 (8)_
v1_GRMZM2G075104_P01 4a53Zea mays0102563784 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1184(2) U-box(2) Ufd2P_core(1)
TargetP: Cytoplasm (Class 2 C0.137; M0.165; S0.088; _0.765)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 1038 aa (-cTP 1011)
Molecular Weight 117.53 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help