PPDB

The Plant Proteome Database

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AT5G15390.1   tRNA/rRNA methyltransferase (SpoU) family protein

Lab Annot. tRNA/rRNA methyltransferase (SpoU) protein
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15390.2 11Arabidopsis thaliana02601001000 (0)C
Os07g40700.1 7Oryza sativa3E-12328365740 (0)C
Os07g40700.2 7Oryza sativa3E-12328365740 (0)C
GRMZM2G026869_P03 3.21Zea mays2E-12830263720 (0)C
Zm00001eb326670_P001 agpv5Zea mays2E-12830263720 (0)C
Zm00001eb326670_P003 agpv5Zea mays2E-12830263720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SpoU_methylase(1)
TargetP: Chloroplast (Class 1 C0.855; M0.017; S0.037; _0.043)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 350 aa (-cTP 291) (-lTP 213)
Molecular Weight 38.85 kDA(-cTP 32.45)(-lTP 23.74)
PI 6.64(-cTP 5.84)(-lTP 6.085)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1526Detail       leaf [A. thaliana] co-IP GST-ClpS 100ug bait stromaclpc1 x clps (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help