PPDB

The Plant Proteome Database

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AT5G15350.1   early nodulin-like protein 17

Lab Annot. plastocyanin-like domain-containing protein
Mapman: 26.19 misc.plastocyanin-like
Curated Location plasma membrane (Pubmed: 12068095 12805588 )

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G12880.1 11Arabidopsis thaliana1E-6812676869 (9)S
AT3G01070.1 11Arabidopsis thaliana1E-5616363790 (0)S
AT2G27035.1 11Arabidopsis thaliana6E-3216038580 (0)S
Os09g38540.1 7Oryza sativa2E-2613737550 (0)S
Os08g37660.1 7Oryza sativa4E-2213732510 (0)S
Os03g55120.1 7Oryza sativa3E-2112038560 (0)S
v1_GRMZM2G485559_P01 4a53Zea mays1E-2512838540 (0)S
GRMZM2G485559_P01 3.21Zea mays1E-2512838540 (0)S
Zm00001eb320500_P001 agpv5Zea mays1E-2512838540 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cu_bind_like(1) DUF5615(1) MIX(2)
TargetP: Secreted (Class 1 C0.011; M0.087; S0.925; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 172 aa (-cTP 147)
Molecular Weight 19.43 kDA(-cTP )
PI 9.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
17317660(Plasma Membrane proteome)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
WallDB-E.Jamet(cell wall reference proteome)
22060019(phosphoproteome - N-starved seedlings)
21325567(root-proteome (wt & det3))
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help