PPDB

PPDB	The Plant Proteome Database

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AT5G15280.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55840.3 11 Arabidopsis thaliana 4E-50 997 21 40 0 (0) _
AT5G55840.1 11 Arabidopsis thaliana 8E-50 997 21 40 0 (0) M
AT5G55840.2 11 Arabidopsis thaliana 8E-50 997 21 40 0 (0) M
Os03g07220.1 7 Oryza sativa 0 1144 31 55 0 (0) M
Os01g06000.1 7 Oryza sativa 5E-36 700 22 41 0 (0) _
Os05g19390.1 7 Oryza sativa 1E-35 820 19 41 0 (0) M
Zm00001eb005280_P003 agpv5 Zea mays 0 1161 33 55 0 (0) M
Zm00001eb005280_P001 agpv5 Zea mays 0 1161 33 55 0 (0) M
GRMZM2G362942_P01 3.21 Zea mays 0 1080 33 55 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) Clathrin(4) Mtf2(2) PPR(19) PPR_1(18) PPR_2(17) PPR_3(10) PPR_long(9)
TargetP:	Chloroplast (Class 3 C0.587; M0.150; S0.016; _0.004)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1227 aa (-cTP 1163)
Molecular Weight	139.61 kDA(-cTP 132.62)
PI	7.64(-cTP 7.07)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data