PPDB

The Plant Proteome Database

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AT5G15210.1   homeobox protein 30

Lab Annot.
Mapman: 27.3.80 RNA.regulation of transcription.zf-HD
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G28920.1 11Arabidopsis thaliana2E-6424461682 (2)_
AT1G69600.1 11Arabidopsis thaliana2E-5220647580 (0)_
AT4G24660.2 11Arabidopsis thaliana5E-4719147580 (0)_
Os09g29130.1 7Oryza sativa2E-4221942530 (0)_
Os08g37400.1 7Oryza sativa2E-4222640510 (0)_
Os05g50310.1 7Oryza sativa3E-4019840520 (0)_
v1_GRMZM2G328438_P01 4a53Zea mays5E-4322341502 (2)_
GRMZM2G328438_P01 3.21Zea mays5E-4322341500 (0)_
Zm00001eb344600_P001 agpv5Zea mays5E-4322341500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ZF-HD_dimer(1)
TargetP: Cytoplasm (Class 2 C0.236; M0.041; S0.019; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 271 aa (-cTP 245)
Molecular Weight 29.38 kDA(-cTP )
PI 9.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help