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AT5G15170.1
tyrosyl-DNA phosphodiesterase-like protein
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| Lab Annot. |
tyrosyl-DNA phosphodiesterase-related
Mapman: 35.1 not assigned.no ontology |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
FHA(1) FHA_2(1) Tyr-DNA_phospho(1) |
| TargetP: |
Chloroplast (Class 5 C0.509; M0.055; S0.021; _0.375) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
605 aa (-cTP 531) |
| Molecular Weight |
68.14 kDA(-cTP 60.26) |
| PI |
8.99(-cTP 8.81) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 543 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >600 kDa (HMA) | wild-type |
| 874 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 875 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 876 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1447 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 3) |
| 1449 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | abck2xabck3 (rep. 2) |
| 1450 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1530 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | wild-type (rep. 1) |
| 1531 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | wild-type (rep. 1) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 1596 | Detail | | | | | | | | [A. thaliana] | | |
| 1985 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1988 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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Comparative Proteomics Data
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