PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G15060.1   Lateral organ boundaries (LOB) domain family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G31320.1 11Arabidopsis thaliana4E-167946640 (0)M
AT3G13850.1 11Arabidopsis thaliana8E-167343680 (0)C
AT3G47870.1 11Arabidopsis thaliana4E-158048630 (0)S
Os08g31080.1 7Oryza sativa1E-157343650 (0)C
Os01g07480.2 7Oryza sativa6E-1514329450 (0)C
Os01g07480.1 7Oryza sativa6E-1514329450 (0)C
Zm00001eb134030_P001 agpv5Zea mays4E-197248610 (0)M
AC218973.3_FGP003 3.21Zea mays4E-197248610 (0)M
v1_AC218973.3_FGP003 4a53Zea mays4E-197248610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LOB(1)
TargetP: Cytoplasm (Class 5 C0.327; M0.189; S0.023; _0.379)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 141 aa (-cTP 119)
Molecular Weight 15.78 kDA(-cTP )
PI 9.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help