PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G15030.1   paired amphipathic helix Sin3-like protein

Lab Annot. Paired amphipathic helix (PAH2) protein
Mapman: 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15030.2 10Arabidopsis thaliana2E-9013596970 (0)_
AT5G15040.1 11Arabidopsis thaliana1E-238654701 (1)_
AT5G15040.2 11Arabidopsis thaliana1E-238654700 (0)_
Os05g01020.2 7Oryza sativa4E-127746621 (1)C
Os08g25200.1 7Oryza sativa8E-067135520 (0)M
Zm00001eb334400_P004 agpv5Zea mays5E-127744630 (0)M
Zm00001eb334400_P002 agpv5Zea mays5E-127744630 (0)M
Zm00001eb334400_P001 agpv5Zea mays5E-127744630 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1476(1) PAH(2)
TargetP: Cytoplasm (Class 5 C0.310; M0.064; S0.331; _0.434)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 124)
Molecular Weight 15.99 kDA(-cTP )
PI 8.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help