PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G14790.1   ARM repeat superfamily protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01450.1 11Arabidopsis thaliana2E-14833668790 (0)_
AT3G01450.2 11Arabidopsis thaliana2E-14833668790 (0)_
AT3G18530.1 11Arabidopsis thaliana6E-8324660730 (0)_
Os02g20310.1 7Oryza sativa6E-12035953694 (4)_
Os08g42189.2 7Oryza sativa9E-11935952684 (4)_
Os08g42268.1 7Oryza sativa9E-11935952684 (4)_
GRMZM2G017269_P01 3.21Zea mays9E-113281587713 (13)C
v1_GRMZM2G017269_P01 4a53Zea mays9E-113281587710 (10)C
Zm00001eb294930_P001 agpv5Zea mays9E-11328158770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Adaptin_N(1) CLASP_N(1) Cnd1(3) DUF29(1) DUF3652(2) HEAT(4) HEAT_2(3) HEAT_EZ(2)
TargetP: Cytoplasm (Class 5 C0.502; M0.040; S0.094; _0.687)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 346 aa (-cTP 324)
Molecular Weight 38.01 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2245Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help