PPDB

PPDB	The Plant Proteome Database

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AT5G14650.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G14650.2 11 Arabidopsis thaliana 0 305 100 100 0 (0) S
AT1G60590.1 11 Arabidopsis thaliana 2E-179 420 58 69 0 (0) M
AT1G10640.1 11 Arabidopsis thaliana 6E-176 417 58 69 0 (0) M
Os01g44970.1 7 Oryza sativa 4E-167 400 62 73 0 (0) S
Os01g45060.1 7 Oryza sativa 2E-143 338 60 72 0 (0) M
Os06g28670.1 7 Oryza sativa 2E-133 409 49 63 0 (0) M
GRMZM2G037431_P01 3.21 Zea mays 9E-177 399 62 73 0 (0) S
Zm00001eb158930_P001 agpv5 Zea mays 9E-177 399 62 73 0 (0) S
v1_GRMZM2G037431_P01 4a53 Zea mays 9E-177 399 62 73 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_28(1) Pectate_lyase_3(1) Trp_ring(2)
TargetP:	Secreted (Class 3 C0.001; M0.519; S0.930; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	435 aa (-cTP 405)
Molecular Weight	46.48 kDA(-cTP )
PI	8.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data