PPDB

The Plant Proteome Database

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AT5G14540.1   basic salivary proline-rich-like protein (DUF1421)

Lab Annot. unknown function (DUF1421)
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01560.1 11Arabidopsis thaliana1E-15153559670 (0)_
AT3G01560.2 11Arabidopsis thaliana1E-11139963690 (0)_
AT4G28300.1 11Arabidopsis thaliana8E-1917532545 (5)_
Os01g07520.1 7Oryza sativa4E-4120644622 (2)_
Os05g07730.1 7Oryza sativa1E-4017548650 (0)S
Os01g55050.2 7Oryza sativa7E-1612035562 (2)_
GRMZM2G025215_P01 3.21Zea mays7E-7354839500 (0)_
Zm00001eb336590_P001 agpv5Zea mays7E-7354839500 (0)_
v1_GRMZM2G025215_P01 4a53Zea mays7E-7354839500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Coq4(1) DUF1002(1) DUF1421(1) UBA(1)
TargetP: Cytoplasm (Class 2 C0.038; M0.066; S0.153; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 547 aa (-cTP 539)
Molecular Weight 59.10 kDA(-cTP )
PI 5.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help